EnhancerDB
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  3. rs566949071[chr1:172604946]
Enhancers that have rs566949071[chr1:172604946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172604705 172618495 enh27243
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Spleen Thymus
Transcript factors that have rs566949071[chr1:172604946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172604940 172604956 SOX8 JASPAR yes 33141779
chr1 172604941 172604951 HOXA13 JASPAR yes 33141780
chr1 172604942 172604946 YY1 TRANSFAC yes 33141781
chr1 172604945 172604951 TBP TRANSFAC yes 33141782
Genes associated with rs566949071[chr1:172604946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More