EnhancerDB
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  3. rs566989670[chr1:117018759]
Enhancers that have rs566989670[chr1:117018759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs566989670[chr1:117018759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117017235 117018800 ZNF143 GTRD no Epithelial (MCF-7) 21332826
chr1 117017235 117018800 ZNF143 GTRD no Epithelial (MCF-7) 107824256
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 21332839
chr1 117017649 117019107 ZNF143 GTRD no Epithelial (MCF-7) 107824269
chr1 117017712 117018763 ZNF143 GTRD no Epithelial (MCF-7) 21332850
chr1 117017712 117018763 ZNF143 GTRD no Epithelial (MCF-7) 107824279
chr1 117018678 117018970 ZNF274 GTRD no Bone Marrow (K562) 21332886
chr1 117018697 117018965 ZNF274 GTRD no Bone Marrow (K562) 21332887
chr1 117018747 117018921 ZNF274 GTRD no Bone Marrow (K562) 21332888
chr1 117018749 117018759 POU6F2 JASPAR yes 31810960
chr1 117018758 117018773 MEF2C JASPAR yes 31810962
chr1 117018759 117018763 H4TF2 TRANSFAC yes 31810963
Genes associated with rs566989670[chr1:117018759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More