EnhancerDB
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  3. rs567042187[chr1:42268646]
Enhancers that have rs567042187[chr1:42268646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
chr1 42268599 42269123 vista1358
VISTA
Transcript factors that have rs567042187[chr1:42268646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42268418 42268934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802980
chr1 42268638 42268648 MSC JASPAR yes 28424254
chr1 42268638 42268648 MSC JASPAR yes 118280127
chr1 42268643 42268657 TLX1 JASPAR yes 28424255
chr1 42268643 42268657 TLX1 JASPAR yes 118280128
chr1 42268643 42268658 ESR2 JASPAR yes 28424256
chr1 42268643 42268658 ESR2 JASPAR yes 118280129
chr1 42268643 42268663 ESR1 JASPAR yes 28424257
chr1 42268643 42268663 ESR1 JASPAR yes 118280130
Genes associated with rs567042187[chr1:42268646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More