EnhancerDB
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  3. rs567127007[chr1:42223366]
Enhancers that have rs567127007[chr1:42223366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs567127007[chr1:42223366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42223361 42223367 LEF1 TRANSFAC yes 28418366
chr1 42223361 42223367 SOX10 JASPAR yes 28418367
chr1 42223362 42223377 FOXA1 JASPAR yes 28418368
chr1 42223363 42223375 FOXI1 JASPAR yes 28418369
chr1 42223363 42223378 FOXP1 JASPAR yes 28418370
chr1 42223364 42223376 FOXC2 JASPAR yes 28418371
chr1 42223364 42223378 ONECUT3 JASPAR yes 28418372
chr1 42223365 42223376 FOXB1 JASPAR yes 28418373
chr1 42223365 42223376 FOXC1 JASPAR yes 28418374
chr1 42223365 42223381 POU4F2 JASPAR yes 28418375
chr1 42223365 42223381 POU4F3 JASPAR yes 28418376
chr1 42223366 42223370 YY1 TRANSFAC yes 28418377
chr1 42223366 42223381 FOXA1 JASPAR yes 28418378
Genes associated with rs567127007[chr1:42223366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More