EnhancerDB
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  3. rs56720478[chr2:232578904]
Enhancers that have rs56720478[chr2:232578904]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232576396 232588237 enh6203
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs56720478[chr2:232578904]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232578890 232578904 RORA JASPAR yes 81739316
chr2 232578895 232578913 ESR1 JASPAR yes 81739317
chr2 232578895 232578915 PPARG JASPAR yes 81739318
chr2 232578897 232578912 ESR2 JASPAR yes 81739320
chr2 232578903 232578908 GATA2 JASPAR yes 81739322
Genes associated with rs56720478[chr2:232578904], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More