EnhancerDB
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  3. rs56723854[chr1:42149033]
Enhancers that have rs56723854[chr1:42149033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56723854[chr1:42149033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42149024 42149040 RFX5 JASPAR yes 28409710
chr1 42149025 42149044 RFX2 JASPAR yes 28409711
Genes associated with rs56723854[chr1:42149033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More