EnhancerDB
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  3. rs56747107[chr19:2055216]
Enhancers that have rs56747107[chr19:2055216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2053625 2070755 enh4956
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myotube) Heart
Transcript factors that have rs56747107[chr19:2055216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2053764 2055850 TCF7L2 GTRD no Colon (HCT116) 21834139
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 21834143
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356650
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356651
chr19 2053949 2063305 TCF7L2 GTRD no Colon (HCT116) 108356652
chr19 2054425 2057089 ZNF274 GTRD no Cervix (HeLa-S3) 21834146
chr19 2054425 2057089 ZNF274 GTRD no Cervix (HeLa-S3) 108356653
chr19 2054538 2058987 ZNF274 GTRD no Blood (GM12878) 108356654
chr19 2054547 2055253 TCF7L2 GTRD no Colon (HCT116) 21834147
chr19 2054557 2056728 ZNF274 GTRD no Blood (GM12878) 108356655
chr19 2054606 2056845 ZNF274 GTRD no Blood (GM12878) 108356656
chr19 2054701 2055337 TCF7L2 GTRD no Colon (HCT116) 21834152
chr19 2054715 2055265 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21834156
chr19 2055199 2055218 PAX5 JASPAR yes 112044985
Genes associated with rs56747107[chr19:2055216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More