EnhancerDB
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  3. rs568593354[chr1:54940386]
Enhancers that have rs568593354[chr1:54940386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54937905 54958655 enh11871
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Muscle (A673) Placenta Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs568593354[chr1:54940386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54939862 54940536 ZNF274 GTRD no Liver (HepG2) 107805091
chr1 54939929 54940600 ZBTB33 GTRD no Brain (SK-N-SH) 107805092
chr1 54939945 54940481 ZNF274 GTRD no Liver (HepG2) 107805093
chr1 54939946 54940574 ZBTB33 GTRD no Brain (SK-N-SH) 107805094
chr1 54939962 54940500 ZNF274 GTRD no Liver (HepG2) 107805095
chr1 54940092 54940477 ZNF274 GTRD no Bone Marrow (K562) 107805096
chr1 54940151 54940527 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805097
chr1 54940199 54940689 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107805098
chr1 54940383 54940402 PAX5 JASPAR yes 28987639
Genes associated with rs568593354[chr1:54940386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More