EnhancerDB
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  3. rs56899642[chr6:35135672]
Enhancers that have rs56899642[chr6:35135672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35131438 35156295 enh23174
Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56899642[chr6:35135672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35135651 35135672 IRF1 JASPAR yes 101263547
chr6 35135657 35135678 IRF1 JASPAR yes 101263549
chr6 35135659 35135674 PRDM1 JASPAR yes 101263550
chr6 35135659 35135674 STAT2 JASPAR yes 101263551
chr6 35135662 35135677 FOXP1 JASPAR yes 101263552
chr6 35135663 35135678 FOXP1 JASPAR yes 101263553
chr6 35135663 35135678 MEF2C JASPAR yes 101263554
chr6 35135665 35135680 FOXP1 JASPAR yes 101263555
Genes associated with rs56899642[chr6:35135672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More