EnhancerDB
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  3. rs56900589[chr1:226323244]
Enhancers that have rs56900589[chr1:226323244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226318797 226325655 enh50228
Prostate (PC-3) Prostate (RWPE1) Large Intestine Stomach Thyroid Pancreas Epithelial (MCF-7)
Transcript factors that have rs56900589[chr1:226323244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226322956 226323491 ZNF143 GTRD no Epithelial (MCF-7) 21386937
chr1 226322992 226323480 ZNF143 GTRD no Epithelial (MCF-7) 21386938
chr1 226322997 226323418 ZNF143 GTRD no Epithelial (MCF-7) 21386939
chr1 226323038 226323446 ZNF143 GTRD no Epithelial (MCF-7) 21386940
chr1 226323058 226323453 ZNF143 GTRD no Epithelial (MCF-7) 21386941
chr1 226323231 226323244 NFKB1 JASPAR yes 35794762
chr1 226323231 226323244 NFKB2 JASPAR yes 35794763
chr1 226323232 226323245 NFKB2 JASPAR yes 35794764
chr1 226323233 226323244 NFKB1 JASPAR yes 35794765
chr1 226323234 226323244 REL JASPAR yes 35794766
chr1 226323242 226323258 GLIS1 JASPAR yes 35794767
Genes associated with rs56900589[chr1:226323244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More