EnhancerDB
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  3. rs570558927[chr1:224350654]
Enhancers that have rs570558927[chr1:224350654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224350394 224354695 enh67295
Neural Stem Cells (H9)
Transcript factors that have rs570558927[chr1:224350654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224350647 224350660 EOMES JASPAR yes 35690947
chr1 224350649 224350659 TBR1 JASPAR yes 35690948
chr1 224350650 224350660 TBX21 JASPAR yes 35690949
chr1 224350651 224350659 MGA JASPAR yes 35690950
chr1 224350651 224350659 TBX15 JASPAR yes 35690951
chr1 224350651 224350659 TBX1 JASPAR yes 35690952
chr1 224350651 224350659 TBX4 JASPAR yes 35690953
chr1 224350651 224350659 TBX5 JASPAR yes 35690954
chr1 224350651 224350660 ZEB1 JASPAR yes 35690955
chr1 224350651 224350663 PKNOX1 JASPAR yes 35690956
chr1 224350651 224350663 PKNOX2 JASPAR yes 35690957
chr1 224350651 224350663 TGIF1 JASPAR yes 35690958
chr1 224350651 224350663 TGIF2 JASPAR yes 35690959
chr1 224350651 224350666 SCRT1 JASPAR yes 35690960
chr1 224350652 224350662 FIGLA JASPAR yes 35690961
chr1 224350652 224350662 ID4 JASPAR yes 35690962
chr1 224350652 224350662 MSC JASPAR yes 35690963
chr1 224350652 224350662 MYF6 JASPAR yes 35690964
chr1 224350652 224350662 TCF3 JASPAR yes 35690965
chr1 224350652 224350662 TCF4 JASPAR yes 35690966
chr1 224350653 224350662 SNAI2 JASPAR yes 35690967
chr1 224350654 224350659 USF2 TRANSFAC yes 35690968
Genes associated with rs570558927[chr1:224350654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More