EnhancerDB
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  3. rs570877381[chr1:17228971]
Enhancers that have rs570877381[chr1:17228971]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs570877381[chr1:17228971]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17228969 17228973 LFA1 TRANSFAC yes 27063762
chr1 17228969 17228980 USF2 JASPAR yes 27063763
chr1 17228969 17228981 HES5 JASPAR yes 27063764
chr1 17228969 17228981 HES7 JASPAR yes 27063765
chr1 17228970 17228980 BHLHE40 JASPAR yes 27063766
chr1 17228970 17228980 BHLHE41 JASPAR yes 27063767
chr1 17228970 17228980 HEY1 JASPAR yes 27063768
chr1 17228970 17228980 HEY2 JASPAR yes 27063769
chr1 17228970 17228980 MAX JASPAR yes 27063770
chr1 17228970 17228980 MNT JASPAR yes 27063771
chr1 17228970 17228980 TFE3 JASPAR yes 27063772
chr1 17228970 17228980 TFEB JASPAR yes 27063773
Genes associated with rs570877381[chr1:17228971], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More