EnhancerDB
  1. Home
  2. SNP
  3. rs571530821[chr1:42139061]
Enhancers that have rs571530821[chr1:42139061]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs571530821[chr1:42139061]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42139053 42139063 POU6F2 JASPAR yes 28408396
chr1 42139057 42139061 YY1 TRANSFAC yes 28408397
chr1 42139058 42139072 ONECUT3 JASPAR yes 28408398
Genes associated with rs571530821[chr1:42139061], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More