EnhancerDB
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  3. rs571682228[chr1:200302589]
Enhancers that have rs571682228[chr1:200302589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs571682228[chr1:200302589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200301636 200302860 ZNF274 GTRD no Liver (HepG2) 21363032
chr1 200301712 200303487 ZNF143 GTRD no Epithelial (MCF-7) 21363033
chr1 200301722 200303174 ZNF143 GTRD no Epithelial (MCF-7) 21363034
chr1 200301802 200302937 ZNF143 GTRD no Epithelial (MCF-7) 21363035
chr1 200301813 200302889 ZNF143 GTRD no Epithelial (MCF-7) 21363036
chr1 200301896 200302775 ZNF143 GTRD no Epithelial (MCF-7) 21363037
chr1 200301899 200302818 ZNF143 GTRD no Epithelial (MCF-7) 21363038
chr1 200301901 200302909 ZNF143 GTRD no Epithelial (MCF-7) 21363039
chr1 200301914 200302745 ZNF143 GTRD no Epithelial (MCF-7) 21363040
chr1 200301916 200303073 ZNF143 GTRD no Epithelial (MCF-7) 21363041
chr1 200301917 200302646 ZNF143 GTRD no Epithelial (MCF-7) 21363042
chr1 200301948 200302917 ZNF143 GTRD no Epithelial (MCF-7) 21363043
chr1 200301956 200302822 ZNF143 GTRD no Epithelial (MCF-7) 21363044
chr1 200301959 200302725 ZNF143 GTRD no Epithelial (MCF-7) 21363045
chr1 200301960 200302805 ZNF143 GTRD no Epithelial (MCF-7) 21363046
chr1 200301966 200302823 ZNF143 GTRD no Epithelial (MCF-7) 21363047
chr1 200301972 200302600 ZNF274 GTRD no Liver (HepG2) 21363048
chr1 200302001 200302688 ZNF143 GTRD no Epithelial (MCF-7) 21363049
chr1 200302006 200303281 ZNF143 GTRD no Epithelial (MCF-7) 21363050
chr1 200302021 200302822 ZNF274 GTRD no Liver (HepG2) 21363051
chr1 200302024 200303009 ZNF143 GTRD no Epithelial (MCF-7) 21363052
chr1 200302032 200303289 ZNF143 GTRD no Epithelial (MCF-7) 21363054
chr1 200302033 200303229 ZNF143 GTRD no Epithelial (MCF-7) 21363055
chr1 200302046 200302853 ZNF143 GTRD no Epithelial (MCF-7) 21363056
chr1 200302073 200302929 ZNF143 GTRD no Epithelial (MCF-7) 21363057
chr1 200302074 200302938 ZNF143 GTRD no Epithelial (MCF-7) 21363058
chr1 200302080 200302906 ZNF143 GTRD no Epithelial (MCF-7) 21363059
chr1 200302097 200302923 ZNF143 GTRD no Epithelial (MCF-7) 21363060
chr1 200302102 200303042 ZNF143 GTRD no Epithelial (MCF-7) 21363061
chr1 200302119 200302613 ZNF274 GTRD no Liver (HepG2) 21363063
chr1 200302131 200302823 TCF7L2 GTRD no Colon (HCT116) 21363064
chr1 200302152 200302596 TCF7L2 GTRD no Colon (HCT116) 21363065
chr1 200302155 200302735 ZNF143 GTRD no Epithelial (MCF-7) 21363066
chr1 200302171 200302680 TCF7L2 GTRD no Colon (HCT116) 21363067
chr1 200302188 200302777 TCF7L2 GTRD no Colon (HCT116) 21363068
chr1 200302211 200302589 TCF7L2 GTRD no Colon (HCT116) 21363069
chr1 200302212 200302589 ZNF274 GTRD no Liver (HepG2) 21363070
chr1 200302234 200302615 ZNF143 GTRD no Epithelial (MCF-7) 21363072
chr1 200302251 200302900 ZNF274 GTRD no Liver (HepG2) 21363074
chr1 200302534 200302789 ZNF274 GTRD no Liver (HepG2) 21363076
Genes associated with rs571682228[chr1:200302589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More