EnhancerDB
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  3. rs571820200[chr1:2477466]
Enhancers that have rs571820200[chr1:2477466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2471065 2481828 enh9
Bone Marrow (K562) Prostate (RWPE1) Blood (T-cell) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
chr1 2477415 2477971 vista78
VISTA
Transcript factors that have rs571820200[chr1:2477466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801828
chr1 2474585 2478941 TCF7L2 GTRD no Colon (HCT116) 107801829
chr1 2477448 2477466 TP53 JASPAR yes 26243822
chr1 2477448 2477466 TP53 JASPAR yes 118216844
chr1 2477457 2477469 HES7 JASPAR yes 26243825
chr1 2477457 2477469 HES7 JASPAR yes 118216847
chr1 2477458 2477467 SNAI2 JASPAR yes 26243826
chr1 2477458 2477467 SNAI2 JASPAR yes 118216848
chr1 2477458 2477468 HEY2 JASPAR yes 26243827
chr1 2477458 2477468 ID4 JASPAR yes 26243828
chr1 2477458 2477468 TCF4 JASPAR yes 26243829
chr1 2477458 2477468 HEY2 JASPAR yes 118216849
chr1 2477458 2477468 ID4 JASPAR yes 118216850
chr1 2477458 2477468 TCF4 JASPAR yes 118216851
Genes associated with rs571820200[chr1:2477466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More