EnhancerDB
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  3. rs572024276[chr17:65220036]
Enhancers that have rs572024276[chr17:65220036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65215273 65222355 enh69309
Brain (SK-N-SH) Prostate (RWPE1) Muscle (A673) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs572024276[chr17:65220036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65216849 65221199 ZNF143 GTRD no Epithelial (MCF-7) 21782030
chr17 65216849 65221199 ZNF143 GTRD no Epithelial (MCF-7) 108285487
chr17 65220002 65220332 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108285488
chr17 65220008 65220358 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285489
chr17 65220022 65220037 LEF1 JASPAR yes 55486511
chr17 65220023 65220037 TCF7L2 JASPAR yes 55486512
chr17 65220029 65220046 RARA JASPAR yes 55486513
chr17 65220032 65220416 USF1 UCSC Txn Factor no Conserved 108285490
chr17 65220032 65220416 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108285491
Genes associated with rs572024276[chr17:65220036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More