EnhancerDB
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  3. rs572028311[chr1:42272560]
Enhancers that have rs572028311[chr1:42272560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
chr1 42272535 42272820 vista1359
VISTA
Transcript factors that have rs572028311[chr1:42272560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42272383 42272899 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802981
chr1 42272558 42272572 PLAG1 JASPAR yes 28424808
chr1 42272558 42272572 PLAG1 JASPAR yes 118280190
chr1 42272558 42272573 NR2C2 JASPAR yes 28424809
chr1 42272558 42272573 NR2C2 JASPAR yes 118280191
Genes associated with rs572028311[chr1:42272560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More