EnhancerDB
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  3. rs572102609[chr16:3875601]
Enhancers that have rs572102609[chr16:3875601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3866625 3877475 enh3859
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Brain (SK-N-SH) Blood (GM12878) Thyroid Breast Blood (Karpas-422) Muscle (Myoblast) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs572102609[chr16:3875601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3875587 3875608 IRF1 JASPAR yes 9232121
chr16 3875590 3875605 FOXP1 JASPAR yes 9232122
chr16 3875591 3875612 IRF1 JASPAR yes 9232123
chr16 3875592 3875607 FOXP1 JASPAR yes 9232124
chr16 3875593 3875614 IRF1 JASPAR yes 9232125
chr16 3875595 3875609 STAT1 JASPAR yes 9232126
chr16 3875595 3875610 PRDM1 JASPAR yes 9232127
chr16 3875595 3875610 STAT2 JASPAR yes 9232128
chr16 3875597 3875618 IRF1 JASPAR yes 9232129
Genes associated with rs572102609[chr16:3875601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More