EnhancerDB
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  3. rs572142904[chr17:41440030]
Enhancers that have rs572142904[chr17:41440030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41431865 41453035 enh4419
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs572142904[chr17:41440030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41438826 41440732 TEF1 GTRD no Bone (Osteoblast) 21759885
chr17 41440015 41440030 FOXA1 JASPAR yes 54338854
chr17 41440016 41440031 FOXP1 JASPAR yes 54338856
chr17 41440017 41440031 ONECUT2 JASPAR yes 54338858
chr17 41440017 41440031 ONECUT3 JASPAR yes 54338859
chr17 41440020 41440035 FOXP1 JASPAR yes 54338863
chr17 41440021 41440033 FOXC2 JASPAR yes 54338864
chr17 41440024 41440039 FOXP1 JASPAR yes 54338866
chr17 41440027 41440042 MEF2C JASPAR yes 54338867
Genes associated with rs572142904[chr17:41440030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More