EnhancerDB
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  3. rs57215208[chr17:41442962]
Enhancers that have rs57215208[chr17:41442962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41431865 41453035 enh4419
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs57215208[chr17:41442962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41442742 41443280 ZBTB33 GTRD no Brain (SK-N-SH) 21759889
chr17 41442747 41443107 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21759890
chr17 41442773 41443257 ZNF274 GTRD no Cervix (HeLa-S3) 21759891
chr17 41442788 41443038 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21759892
chr17 41442819 41443111 ZBTB33 GTRD no Brain (SK-N-SH) 21759893
chr17 41442961 41442965 NFE TRANSFAC yes 54339347
Genes associated with rs57215208[chr17:41442962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 42154114 42201070 - HDAC5 ENSG00000108840.11 42201070 711152 Heart 0.267923 15914