EnhancerDB
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  3. rs572228840[chr17:1975036]
Enhancers that have rs572228840[chr17:1975036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 1972490 1982235 enh32047
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (Myoblast) Uterus Heart
chr17 1974774 1975359 vista23685
VISTA
Transcript factors that have rs572228840[chr17:1975036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 1974780 1975044 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108229539
chr17 1975028 1975038 SP1 JASPAR yes 21182860
chr17 1975028 1975038 SP1 JASPAR yes 52720365
chr17 1975029 1975045 GLIS1 JASPAR yes 21182861
chr17 1975029 1975045 GLIS1 JASPAR yes 52720366
chr17 1975030 1975041 E2F4 JASPAR yes 21182863
chr17 1975030 1975041 E2F4 JASPAR yes 52720368
chr17 1975030 1975044 GLIS2 JASPAR yes 21182864
chr17 1975030 1975044 GLIS2 JASPAR yes 52720369
chr17 1975031 1975036 SP1 TRANSFAC yes 21182865
chr17 1975031 1975036 SP1 TRANSFAC yes 52720370
chr17 1975031 1975037 SP1 TRANSFAC yes 21182866
chr17 1975031 1975037 SP1 TRANSFAC yes 52720371
chr17 1975031 1975041 SP1 JASPAR yes 21182867
chr17 1975031 1975041 SP1 JASPAR yes 52720372
chr17 1975032 1975042 ZNF740 JASPAR yes 21182868
chr17 1975032 1975042 ZNF740 JASPAR yes 52720373
chr17 1975033 1975043 SP1 JASPAR yes 21182869
chr17 1975033 1975043 ZNF740 JASPAR yes 21182870
chr17 1975033 1975043 SP1 JASPAR yes 52720374
chr17 1975033 1975043 ZNF740 JASPAR yes 52720375
Genes associated with rs572228840[chr17:1975036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More