EnhancerDB
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  3. rs572239640[chr17:39653359]
Enhancers that have rs572239640[chr17:39653359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39651125 39655275 enh81209
Prostate (PC-3)
Transcript factors that have rs572239640[chr17:39653359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39652059 39653412 ZNF274 GTRD no Liver (HepG2) 108258190
chr17 39652132 39654494 ZNF274 GTRD no Liver (HepG2) 108258191
chr17 39652159 39653428 ZNF274 GTRD no Liver (HepG2) 108258192
chr17 39652283 39654965 ZBTB33 GTRD no Lung (A549) 108258193
chr17 39652283 39654965 ZBTB33 GTRD no Lung (A549) 108258194
chr17 39652321 39654429 ZNF274 GTRD no Liver (HepG2) 108258195
chr17 39652350 39654316 ZNF274 GTRD no Liver (HepG2) 108258197
chr17 39652356 39654423 ZNF274 GTRD no Liver (HepG2) 108258198
chr17 39652439 39654322 ZNF274 GTRD no Liver (HepG2) 108258200
chr17 39652446 39654320 ZNF274 GTRD no Liver (HepG2) 108258201
chr17 39652452 39653966 TCF7L2 GTRD no Colon (HCT116) 108258202
chr17 39652459 39654066 TCF7L2 GTRD no Colon (HCT116) 108258203
chr17 39652501 39654185 TCF7L2 GTRD no Colon (HCT116) 108258204
chr17 39652554 39655050 ZNF143 GTRD no Epithelial (MCF-7) 108258205
chr17 39652554 39655050 ZNF143 GTRD no Epithelial (MCF-7) 108258206
chr17 39652561 39654327 ZNF274 GTRD no Liver (HepG2) 108258207
chr17 39652609 39653476 ZNF274 GTRD no Liver (HepG2) 108258208
chr17 39652620 39653439 ZNF274 GTRD no Liver (HepG2) 108258209
chr17 39652628 39654046 TCF7L2 GTRD no Colon (HCT116) 108258210
chr17 39652640 39654323 ZNF274 GTRD no Liver (HepG2) 108258211
chr17 39652682 39654791 ZNF274 GTRD no Blood (GM12878) 108258213
chr17 39652682 39654791 ZNF274 GTRD no Blood (GM12878) 108258214
chr17 39652703 39654554 ZNF274 GTRD no Bone Marrow (K562) 108258216
chr17 39652715 39653467 ZNF143 GTRD no Epithelial (MCF-7) 108258217
chr17 39652727 39654425 ZNF274 GTRD no Bone Marrow (K562) 108258218
chr17 39652728 39653388 ZNF274 GTRD no Liver (HepG2) 108258219
chr17 39652768 39653470 ZNF274 GTRD no Liver (HepG2) 108258221
chr17 39652771 39653475 ZNF274 GTRD no Liver (HepG2) 108258222
chr17 39652794 39653381 ZBTB33 GTRD no Lung (A549) 108258223
chr17 39652856 39653432 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108258226
chr17 39652867 39653483 ZNF274 GTRD no Liver (HepG2) 108258227
chr17 39652868 39653385 ZNF274 GTRD no Liver (HepG2) 108258228
chr17 39652881 39653417 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108258229
chr17 39652953 39653409 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258232
chr17 39652957 39653421 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258233
chr17 39652974 39653377 CTCF UCSC Txn Factor no Conserved 108258236
chr17 39652978 39653782 POLR2A UCSC Txn Factor no Conserved 108258238
chr17 39652998 39653368 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108258242
chr17 39653006 39653402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258244
chr17 39653020 39654158 TCF7L2 GTRD no Colon (HCT116) 108258251
chr17 39653032 39654729 ZNF143 GTRD no Epithelial (MCF-7) 108258254
chr17 39653032 39654729 ZNF143 GTRD no Epithelial (MCF-7) 108258255
chr17 39653043 39653377 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108258258
chr17 39653043 39653479 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108258259
chr17 39653067 39654640 ZNF274 GTRD no Bone Marrow (K562) 108258269
chr17 39653067 39654640 ZNF274 GTRD no Bone Marrow (K562) 108258270
chr17 39653083 39653607 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108258273
chr17 39653116 39653392 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108258277
chr17 39653117 39653393 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108258278
chr17 39653131 39653635 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108258280
chr17 39653143 39653742 ZNF274 GTRD no Bone Marrow (K562) 108258281
chr17 39653145 39653634 ZNF143 GTRD no Epithelial (MCF-7) 108258282
chr17 39653151 39653376 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108258283
chr17 39653162 39653472 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108258284
chr17 39653194 39653458 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258285
chr17 39653195 39654562 ZNF143 GTRD no Epithelial (MCF-7) 108258286
chr17 39653198 39653415 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258288
chr17 39653208 39654258 ZNF274 GTRD no Bone Marrow (K562) 108258289
chr17 39653222 39653472 ZNF274 GTRD no Bone Marrow (K562) 108258290
chr17 39653223 39653452 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108258291
chr17 39653238 39654559 ZNF143 GTRD no Epithelial (MCF-7) 108258292
chr17 39653253 39654971 ZBTB33 GTRD no Lung (A549) 108258293
chr17 39653253 39654971 ZBTB33 GTRD no Lung (A549) 108258294
chr17 39653255 39654493 ZNF274 GTRD no Bone Marrow (K562) 108258295
chr17 39653259 39654435 ZBTB33 GTRD no Lung (A549) 108258296
chr17 39653272 39653794 ZNF274 GTRD no Bone Marrow (K562) 108258297
chr17 39653276 39654787 ZNF274 GTRD no Bone Marrow (K562) 108258298
chr17 39653276 39654787 ZNF274 GTRD no Bone Marrow (K562) 108258299
chr17 39653281 39654174 ZNF274 GTRD no Bone Marrow (K562) 108258300
chr17 39653287 39653400 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108258301
chr17 39653293 39654149 ZNF143 GTRD no Epithelial (MCF-7) 108258302
chr17 39653298 39653682 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258303
chr17 39653310 39654179 ZNF274 GTRD no Bone Marrow (K562) 108258304
chr17 39653322 39654226 ZNF274 GTRD no Bone Marrow (K562) 108258305
chr17 39653332 39654420 ZNF274 GTRD no Blood (GM12878) 108258306
chr17 39653332 39655230 ZBTB33 GTRD no Lung (A549) 108258307
chr17 39653332 39655230 ZBTB33 GTRD no Lung (A549) 108258308
chr17 39653334 39654349 ZNF143 GTRD no Epithelial (MCF-7) 108258309
chr17 39653347 39653366 REST JASPAR yes 21237928
chr17 39653347 39653366 REST JASPAR yes 54261607
chr17 39653350 39653790 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108258310
chr17 39653350 39654555 ZNF274 GTRD no Bone Marrow (K562) 108258311
Genes associated with rs572239640[chr17:39653359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More