EnhancerDB
  1. Home
  2. SNP
  3. rs572286678[chr12:48293420]
Enhancers that have rs572286678[chr12:48293420]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 48274565 48298301 enh43733
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Liver Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs572286678[chr12:48293420]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 48293407 48293422 ZIC3 JASPAR yes 120726414
chr12 48293407 48293422 ZIC4 JASPAR yes 120726415
chr12 48293408 48293422 ZIC1 JASPAR yes 120726416
chr12 48293410 48293425 ZIC3 JASPAR yes 120726417
chr12 48293415 48293425 SP1 JASPAR yes 120726418
chr12 48293418 48293423 SP1 TRANSFAC yes 120726419
Genes associated with rs572286678[chr12:48293420], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More