EnhancerDB
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  3. rs572352828[chr1:46336433]
Enhancers that have rs572352828[chr1:46336433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 46325665 46343935 enh326
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs572352828[chr1:46336433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 46336427 46336448 IRF1 JASPAR yes 28623924
chr1 46336429 46336444 FOXP1 JASPAR yes 28623925
chr1 46336430 46336445 FOXP1 JASPAR yes 28623926
chr1 46336431 46336437 TBP TRANSFAC yes 28623927
chr1 46336431 46336446 FOXP1 JASPAR yes 28623928
chr1 46336431 46336452 IRF1 JASPAR yes 28623929
chr1 46336432 46336447 FOXP1 JASPAR yes 28623930
Genes associated with rs572352828[chr1:46336433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More