EnhancerDB
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  3. rs57255993[chr12:52741701]
Enhancers that have rs57255993[chr12:52741701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52736445 52747715 enh80197
Prostate (PC-3) Stomach Thyroid Colon (HCT116) Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs57255993[chr12:52741701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52740601 52742646 ZNF143 GTRD no Epithelial (MCF-7) 21546980
chr12 52741287 52741947 ZNF143 GTRD no Epithelial (MCF-7) 21546983
chr12 52741337 52742010 ZNF143 GTRD no Epithelial (MCF-7) 21546984
chr12 52741338 52741959 TCF7L2 GTRD no Colon (HCT116) 21546985
chr12 52741394 52741831 ZNF143 GTRD no Epithelial (MCF-7) 21546986
chr12 52741403 52741979 ZNF143 GTRD no Epithelial (MCF-7) 21546987
chr12 52741491 52742634 ZNF143 GTRD no Epithelial (MCF-7) 21546988
chr12 52741676 52742562 TCF7L2 GTRD no Colon (HCT116) 21546989
chr12 52741697 52741702 GATA2 JASPAR yes 120937707
chr12 52741699 52741710 FOXC1 JASPAR yes 120937708
chr12 52741700 52741704 YY1 TRANSFAC yes 120937709
chr12 52741701 52741716 FOXP1 JASPAR yes 120937710
chr12 52741701 52741722 IRF1 JASPAR yes 120937711
Genes associated with rs57255993[chr12:52741701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More