EnhancerDB
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  3. rs572843855[chr17:41919327]
Enhancers that have rs572843855[chr17:41919327]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41915025 41919435 enh69276
Pancreas Neural Stem Cells (H9) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs572843855[chr17:41919327]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41917252 41919794 ZNF143 GTRD no Epithelial (MCF-7) 21761773
chr17 41917701 41919339 ZNF143 GTRD no Epithelial (MCF-7) 21761774
chr17 41917759 41920407 ZNF143 GTRD no Epithelial (MCF-7) 21761775
chr17 41917830 41920017 ZNF143 GTRD no Epithelial (MCF-7) 21761777
chr17 41917847 41919943 ZNF143 GTRD no Epithelial (MCF-7) 21761778
chr17 41917859 41920105 ZNF143 GTRD no Epithelial (MCF-7) 21761779
chr17 41917928 41920277 ZNF143 GTRD no Epithelial (MCF-7) 21761781
chr17 41917968 41920208 ZNF143 GTRD no Epithelial (MCF-7) 21761783
chr17 41918007 41920340 ZNF143 GTRD no Epithelial (MCF-7) 21761786
chr17 41918104 41919979 ZNF143 GTRD no Epithelial (MCF-7) 21761787
chr17 41918360 41920235 ZNF143 GTRD no Epithelial (MCF-7) 21761790
chr17 41918516 41919663 ZNF143 GTRD no Epithelial (MCF-7) 21761791
chr17 41919026 41919795 SOX2 GTRD no Neural Stem Cells (H9) 21761795
chr17 41919098 41919557 ZNF143 GTRD no Epithelial (MCF-7) 21761796
chr17 41919129 41919721 ZNF143 GTRD no Epithelial (MCF-7) 21761797
chr17 41919297 41919794 ZNF143 GTRD no Epithelial (MCF-7) 21761798
chr17 41919305 41920395 ZNF143 GTRD no Epithelial (MCF-7) 21761799
chr17 41919312 41919327 PRDM1 JASPAR yes 54377003
chr17 41919322 41920204 ZNF143 GTRD no Epithelial (MCF-7) 21761800
Genes associated with rs572843855[chr17:41919327], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More