EnhancerDB
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  3. rs573427741[chr1:200258132]
Enhancers that have rs573427741[chr1:200258132]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200249825 200279179 enh867
Prostate (PC-3) Liver (HepG2) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs573427741[chr1:200258132]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200258074 200259012 ZNF143 GTRD no Epithelial (MCF-7) 21362759
chr1 200258111 200258132 IRF1 JASPAR yes 34429639
chr1 200258117 200258138 IRF1 JASPAR yes 34429643
chr1 200258119 200258134 IRF9 JASPAR yes 34429644
chr1 200258120 200258134 IRF7 JASPAR yes 34429645
chr1 200258120 200258134 IRF8 JASPAR yes 34429646
chr1 200258121 200258135 STAT1 JASPAR yes 34429647
chr1 200258121 200258136 PRDM1 JASPAR yes 34429648
chr1 200258121 200258136 STAT2 JASPAR yes 34429649
chr1 200258121 200258139 IRF2 JASPAR yes 34429650
chr1 200258122 200258134 IRF1 JASPAR yes 34429651
chr1 200258123 200258144 IRF1 JASPAR yes 34429652
chr1 200258125 200258140 IRF9 JASPAR yes 34429653
Genes associated with rs573427741[chr1:200258132], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More