EnhancerDB
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  3. rs573604102[chr19:1859052]
Enhancers that have rs573604102[chr19:1859052]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1850045 1876795 enh4955
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Pancreas Uterus Thymus
Transcript factors that have rs573604102[chr19:1859052]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355215
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355216
chr19 1850548 1866188 TCF7L2 GTRD no Colon (HCT116) 108355217
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 21832698
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355222
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355223
chr19 1851001 1866019 ZNF274 GTRD no Bone Marrow (K562) 108355224
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 21832714
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355235
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355236
chr19 1853974 1859100 ZNF274 GTRD no Bone Marrow (K562) 108355237
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 21832748
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355295
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355296
chr19 1854835 1859405 ZNF274 GTRD no Blood (GM12878) 108355297
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 21833025
chr19 1857472 1860706 ZNF274 GTRD no Bone Marrow (K562) 108355719
chr19 1859035 1859056 ZNF263 JASPAR yes 112033344
chr19 1859036 1859056 RREB1 JASPAR yes 112033345
chr19 1859038 1859059 ZNF263 JASPAR yes 112033346
chr19 1859040 1859060 RREB1 JASPAR yes 112033348
chr19 1859045 1859055 SP1 JASPAR yes 112033350
chr19 1859047 1859062 NR2C2 JASPAR yes 112033351
chr19 1859048 1859053 SP1 TRANSFAC yes 112033352
chr19 1859049 1859059 ZNF740 JASPAR yes 112033353
chr19 1859051 1859061 SP1 JASPAR yes 112033354
Genes associated with rs573604102[chr19:1859052], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More