-
Home
- SNP
- rs573854459[chr1:2508558]
Enhancers that have rs573854459[chr1:2508558]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
2505345 |
2512455 |
enh11428 |
|
|
Transcript factors that have rs573854459[chr1:2508558]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
2500907
|
2508589
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801830
|
|
|
chr1
|
2500907
|
2508589
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801831
|
|
|
chr1
|
2507537
|
2510246
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107801832
|
|
|
chr1
|
2508558
|
2508568
|
REL
|
JASPAR
|
yes
|
|
26244988
|
|
|
chr1
|
2508558
|
2508569
|
NFKB1
|
JASPAR
|
yes
|
|
26244989
|
|
Genes associated with rs573854459[chr1:2508558], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |