EnhancerDB
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  3. rs573862578[chr1:17229201]
Enhancers that have rs573862578[chr1:17229201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs573862578[chr1:17229201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17229190 17229211 IRF1 JASPAR yes 27063817
chr1 17229193 17229211 IRF2 JASPAR yes 27063819
chr1 17229194 17229209 STAT2 JASPAR yes 27063820
chr1 17229196 17229217 IRF1 JASPAR yes 27063821
chr1 17229201 17229216 FOXP1 JASPAR yes 27063822
Genes associated with rs573862578[chr1:17229201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More