EnhancerDB
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  3. rs573985704[chr12:109002941]
Enhancers that have rs573985704[chr12:109002941]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs573985704[chr12:109002941]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109002935 109002956 IRF1 JASPAR yes 123606203
chr12 109002936 109002957 IRF1 JASPAR yes 123606204
chr12 109002937 109002958 IRF1 JASPAR yes 123606205
chr12 109002938 109002953 FOXP1 JASPAR yes 123606206
chr12 109002940 109002955 FOXP1 JASPAR yes 123606207
chr12 109002941 109002956 FOXP1 JASPAR yes 123606208
Genes associated with rs573985704[chr12:109002941], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More