EnhancerDB
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  3. rs574023422[chr1:17230600]
Enhancers that have rs574023422[chr1:17230600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs574023422[chr1:17230600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17228555 17230938 TCF7L2 GTRD no Colon (HCT116) 107802243
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17230594 17230603 SP1 TRANSFAC yes 27064010
chr1 17230595 17230603 SP1 TRANSFAC yes 27064011
chr1 17230595 17230605 SP1 JASPAR yes 27064012
Genes associated with rs574023422[chr1:17230600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More