-
Home
- SNP
- rs574300174[chr19:677582]
Enhancers that have rs574300174[chr19:677582]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
673705 |
680175 |
enh17835 |
|
|
Transcript factors that have rs574300174[chr19:677582]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
673418
|
682038
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108345587
|
|
|
chr19
|
673418
|
682038
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108345588
|
|
|
chr19
|
673511
|
678559
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345589
|
|
|
chr19
|
674975
|
678423
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345604
|
|
|
chr19
|
674993
|
678647
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108345605
|
|
|
chr19
|
675167
|
678714
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108345609
|
|
|
chr19
|
675188
|
678646
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108345613
|
|
|
chr19
|
675220
|
677703
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108345621
|
|
|
chr19
|
675249
|
678660
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108345626
|
|
|
chr19
|
675256
|
678419
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345628
|
|
|
chr19
|
675269
|
677922
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345632
|
|
|
chr19
|
675307
|
678418
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108345643
|
|
|
chr19
|
675308
|
678454
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345644
|
|
|
chr19
|
675334
|
678389
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345649
|
|
|
chr19
|
675373
|
677967
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108345659
|
|
|
chr19
|
675510
|
678250
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108345683
|
|
|
chr19
|
675552
|
678270
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
108345698
|
|
|
chr19
|
675558
|
677799
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345700
|
|
|
chr19
|
675668
|
677878
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108345711
|
|
|
chr19
|
676416
|
684869
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108345715
|
|
|
chr19
|
676585
|
682134
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108345716
|
|
|
chr19
|
677564
|
677584
|
RREB1
|
JASPAR
|
yes
|
|
111970008
|
|
|
chr19
|
677565
|
677586
|
ZNF263
|
JASPAR
|
yes
|
|
111970009
|
|
|
chr19
|
677566
|
677586
|
RREB1
|
JASPAR
|
yes
|
|
111970010
|
|
|
chr19
|
677569
|
677583
|
PLAG1
|
JASPAR
|
yes
|
|
111970011
|
|
|
chr19
|
677571
|
677585
|
GLIS2
|
JASPAR
|
yes
|
|
111970012
|
|
|
chr19
|
677575
|
677585
|
SP1
|
JASPAR
|
yes
|
|
111970013
|
|
|
chr19
|
677575
|
677585
|
ZNF740
|
JASPAR
|
yes
|
|
111970014
|
|
|
chr19
|
677576
|
677586
|
SP1
|
JASPAR
|
yes
|
|
111970015
|
|
|
chr19
|
677576
|
677586
|
ZNF740
|
JASPAR
|
yes
|
|
111970016
|
|
|
chr19
|
677577
|
677587
|
ZNF740
|
JASPAR
|
yes
|
|
111970017
|
|
|
chr19
|
677582
|
677599
|
RARA
|
JASPAR
|
yes
|
|
111970018
|
|
|
chr19
|
677582
|
677599
|
RXRA
|
JASPAR
|
yes
|
|
111970019
|
|
Genes associated with rs574300174[chr19:677582], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |