EnhancerDB
  1. Home
  2. SNP
  3. rs574352945[chr1:42221297]
Enhancers that have rs574352945[chr1:42221297]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs574352945[chr1:42221297]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42221282 42221297 FOXP1 JASPAR yes 28418016
chr1 42221284 42221304 RREB1 JASPAR yes 28418017
chr1 42221293 42221313 RREB1 JASPAR yes 28418018
chr1 42221296 42221305 SRY JASPAR yes 28418019
Genes associated with rs574352945[chr1:42221297], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More