-
Home
- SNP
- rs574486679[chr1:227731279]
Enhancers that have rs574486679[chr1:227731279]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
227726365 |
227737955 |
enh12735 |
|
|
Transcript factors that have rs574486679[chr1:227731279]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
227726295
|
227731350
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107876487
|
|
|
chr1
|
227726395
|
227731609
|
AR
|
GTRD
|
no
|
Prostate (PC-3)
|
107876488
|
|
|
chr1
|
227727084
|
227731955
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107876491
|
|
|
chr1
|
227727259
|
227732167
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876492
|
|
|
chr1
|
227727292
|
227732125
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876493
|
|
|
chr1
|
227727815
|
227731780
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107876500
|
|
|
chr1
|
227727818
|
227731440
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876502
|
|
|
chr1
|
227727818
|
227731566
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876503
|
|
|
chr1
|
227727838
|
227732430
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876504
|
|
|
chr1
|
227727855
|
227732015
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107876507
|
|
|
chr1
|
227727902
|
227734337
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876510
|
|
|
chr1
|
227727934
|
227731510
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107876514
|
|
|
chr1
|
227728488
|
227731350
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107876520
|
|
|
chr1
|
227728568
|
227731646
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107876524
|
|
|
chr1
|
227728575
|
227732311
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876526
|
|
|
chr1
|
227728590
|
227731621
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876529
|
|
|
chr1
|
227729599
|
227731330
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876545
|
|
|
chr1
|
227729724
|
227731312
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107876547
|
|
|
chr1
|
227729908
|
227731631
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107876554
|
|
|
chr1
|
227729915
|
227731299
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876555
|
|
|
chr1
|
227729981
|
227731418
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876559
|
|
|
chr1
|
227730018
|
227731448
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107876563
|
|
|
chr1
|
227730060
|
227731928
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107876566
|
|
|
chr1
|
227731260
|
227731280
|
PPARG
|
JASPAR
|
yes
|
|
35882932
|
|
|
chr1
|
227731271
|
227731284
|
ELF3
|
JASPAR
|
yes
|
|
35882935
|
|
|
chr1
|
227731272
|
227731283
|
ELF5
|
JASPAR
|
yes
|
|
35882936
|
|
|
chr1
|
227731275
|
227731280
|
ETS2
|
TRANSFAC
|
yes
|
|
35882937
|
|
Genes associated with rs574486679[chr1:227731279], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |