EnhancerDB
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  3. rs574539089[chr17:6561651]
Enhancers that have rs574539089[chr17:6561651]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 6552025 6577412 enh4228
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9)
Transcript factors that have rs574539089[chr17:6561651]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 6560665 6561972 TCF7L2 GTRD no Colon (HCT116) 21740869
chr17 6561242 6562013 TCF7L2 GTRD no Colon (HCT116) 21740870
chr17 6561646 6561656 SP1 JASPAR yes 52922659
Genes associated with rs574539089[chr17:6561651], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More