EnhancerDB
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  3. rs574688530[chr18:55682138]
Enhancers that have rs574688530[chr18:55682138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55677725 55693595 enh4867
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Epithelial (MCF-7)
Transcript factors that have rs574688530[chr18:55682138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55682127 55682138 HOXC13 JASPAR yes 110908317
chr18 55682128 55682138 HOXA13 JASPAR yes 110908319
chr18 55682128 55682138 HOXC10 JASPAR yes 110908320
chr18 55682128 55682138 HOXD13 JASPAR yes 110908321
chr18 55682137 55682154 RXRA JASPAR yes 110908322
Genes associated with rs574688530[chr18:55682138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More