EnhancerDB
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  3. rs575146556[chr12:66174978]
Enhancers that have rs575146556[chr12:66174978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 66168947 66177881 enh58441
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Colon (HCT116) Lung (PC-9)
Transcript factors that have rs575146556[chr12:66174978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 66174168 66175383 TCF7L2 GTRD no Colon (HCT116) 21553383
chr12 66174309 66175321 TCF7L2 GTRD no Colon (HCT116) 21553384
chr12 66174334 66175446 TCF7L2 GTRD no Colon (HCT116) 21553385
chr12 66174388 66175258 TCF7L2 GTRD no Colon (HCT116) 21553386
chr12 66174643 66175237 TCF7L2 GTRD no Colon (HCT116) 21553387
chr12 66174700 66175234 TCF7L2 GTRD no Colon (HCT116) 21553388
chr12 66174973 66174979 TCF4 TRANSFAC yes 121493157
chr12 66174977 66174992 TFAP2C JASPAR yes 121493158
chr12 66174978 66174989 TFAP2A JASPAR yes 121493159
chr12 66174978 66174989 TFAP2B JASPAR yes 121493160
chr12 66174978 66174989 TFAP2C JASPAR yes 121493161
Genes associated with rs575146556[chr12:66174978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More