EnhancerDB
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  3. rs575426849[chr1:172717431]
Enhancers that have rs575426849[chr1:172717431]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172711957 172718375 enh730
Prostate (PC-3) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Lung Blood (OCI-LY7) Lung (A549) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs575426849[chr1:172717431]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172717420 172717431 TFAP2A JASPAR yes 33151273
chr1 172717420 172717431 TFAP2B JASPAR yes 33151274
chr1 172717420 172717431 TFAP2C JASPAR yes 33151275
chr1 172717427 172717432 SP1 TRANSFAC yes 33151277
chr1 172717427 172717433 SP1 TRANSFAC yes 33151278
chr1 172717430 172717451 ZNF263 JASPAR yes 33151279
chr1 172717431 172717435 LFA1 TRANSFAC yes 33151280
Genes associated with rs575426849[chr1:172717431], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More