EnhancerDB
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  3. rs575509600[chr15:42252159]
Enhancers that have rs575509600[chr15:42252159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42246345 42263215 enh3550
Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Heart
Transcript factors that have rs575509600[chr15:42252159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42252139 42252159 PPARG JASPAR yes 23010247
chr15 42252150 42252170 RREB1 JASPAR yes 23010248
chr15 42252156 42252171 FOXP1 JASPAR yes 23010249
chr15 42252157 42252172 FOXP1 JASPAR yes 23010250
chr15 42252158 42252173 FOXP1 JASPAR yes 23010251
chr15 42252159 42252174 FOXP1 JASPAR yes 23010252
chr15 42252159 42252180 IRF1 JASPAR yes 23010253
Genes associated with rs575509600[chr15:42252159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More