EnhancerDB
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  3. rs575859240[chr1:200305816]
Enhancers that have rs575859240[chr1:200305816]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs575859240[chr1:200305816]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200305429 200305959 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363089
chr1 200305450 200305926 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363090
chr1 200305511 200306015 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363091
chr1 200305541 200305925 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363092
chr1 200305566 200305886 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363093
chr1 200305568 200305898 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363094
chr1 200305577 200305917 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363095
chr1 200305583 200305827 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363096
chr1 200305613 200305869 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363097
chr1 200305626 200306006 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363098
chr1 200305627 200305868 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363099
chr1 200305640 200305816 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363100
chr1 200305643 200305919 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363101
chr1 200305651 200305840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363103
chr1 200305655 200305820 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21363104
chr1 200305807 200305821 FOXF2 JASPAR yes 34436262
chr1 200305808 200305819 FOXA1 JASPAR yes 34436263
chr1 200305808 200305823 FOXA1 JASPAR yes 34436264
chr1 200305809 200305820 FOXB1 JASPAR yes 34436265
chr1 200305809 200305820 FOXC1 JASPAR yes 34436266
chr1 200305809 200305821 FOXC2 JASPAR yes 34436267
chr1 200305810 200305822 FOXI1 JASPAR yes 34436268
chr1 200305812 200305820 FOXG1 JASPAR yes 34436269
Genes associated with rs575859240[chr1:200305816], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More