EnhancerDB
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  3. rs575959250[chr6:42109117]
Enhancers that have rs575959250[chr6:42109117]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42097349 42109195 enh9110
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Brain (SK-N-MC) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs575959250[chr6:42109117]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42109102 42109117 NR2C2 JASPAR yes 101696114
chr6 42109103 42109117 PLAG1 JASPAR yes 101696115
chr6 42109104 42109118 PLAG1 JASPAR yes 101696116
chr6 42109110 42109120 ZNF740 JASPAR yes 101696120
chr6 42109111 42109121 ZNF740 JASPAR yes 101696121
Genes associated with rs575959250[chr6:42109117], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More