EnhancerDB
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  3. rs575961519[chr17:2398859]
Enhancers that have rs575961519[chr17:2398859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2383605 2399907 enh32054
Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Thymus Heart
Transcript factors that have rs575961519[chr17:2398859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2395173 2404783 ZBTB33 GTRD no Lung (A549) 108230837
chr17 2395298 2403874 ZBTB33 GTRD no Lung (A549) 108230839
chr17 2395324 2403241 ZBTB33 GTRD no Lung (A549) 108230840
chr17 2395381 2404083 ZBTB33 GTRD no Lung (A549) 108230841
chr17 2395394 2403035 ZNF274 GTRD no Cervix (HeLa-S3) 21739614
chr17 2395394 2403035 ZNF274 GTRD no Cervix (HeLa-S3) 108230842
chr17 2395565 2403182 ZBTB33 GTRD no Lung (A549) 108230847
chr17 2395677 2399004 ZNF274 GTRD no Bone Marrow (K562) 108230849
chr17 2395744 2403778 ZBTB33 GTRD no Lung (A549) 108230853
chr17 2396241 2402929 TCF7L2 GTRD no Colon (HCT116) 21739621
chr17 2396241 2402929 TCF7L2 GTRD no Colon (HCT116) 108230866
chr17 2396367 2402892 TCF7L2 GTRD no Colon (HCT116) 21739625
chr17 2396367 2402892 TCF7L2 GTRD no Colon (HCT116) 108230873
chr17 2398857 2398866 ZEB1 JASPAR yes 52756527
chr17 2398858 2398868 ID4 JASPAR yes 52756528
chr17 2398858 2398868 TCF3 JASPAR yes 52756529
chr17 2398858 2398868 TCF4 JASPAR yes 52756530
chr17 2398859 2398868 SNAI2 JASPAR yes 52756531
Genes associated with rs575961519[chr17:2398859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More