EnhancerDB
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  3. rs575995897[chr1:17231241]
Enhancers that have rs575995897[chr1:17231241]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs575995897[chr1:17231241]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17230272 17232555 POLR2A UCSC Txn Factor no Conserved 107802244
chr1 17231236 17231253 RARA JASPAR yes 27064107
chr1 17231236 17231253 RARA JASPAR yes 118239854
chr1 17231237 17231241 H4TF2 TRANSFAC yes 27064108
Genes associated with rs575995897[chr1:17231241], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More