EnhancerDB
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  3. rs576197533[chr1:172469963]
Enhancers that have rs576197533[chr1:172469963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172464365 172471715 enh12373
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Esophagus Muscle (A673) Placenta Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs576197533[chr1:172469963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172469518 172471197 ZNF143 GTRD no Epithelial (MCF-7) 21350054
chr1 172469547 172470863 ZNF143 GTRD no Epithelial (MCF-7) 21350055
chr1 172469553 172470819 ZNF143 GTRD no Epithelial (MCF-7) 21350056
chr1 172469582 172470883 ZNF143 GTRD no Epithelial (MCF-7) 21350057
chr1 172469584 172470959 ZNF143 GTRD no Epithelial (MCF-7) 21350058
chr1 172469591 172470748 ZNF143 GTRD no Epithelial (MCF-7) 21350059
chr1 172469592 172471039 ZNF143 GTRD no Epithelial (MCF-7) 21350060
chr1 172469612 172470918 ZNF143 GTRD no Epithelial (MCF-7) 21350061
chr1 172469638 172470858 ZNF143 GTRD no Epithelial (MCF-7) 21350062
chr1 172469646 172470576 ZNF143 GTRD no Epithelial (MCF-7) 21350063
chr1 172469653 172470012 ZNF274 GTRD no Cervix (HeLa-S3) 21350064
chr1 172469686 172470637 ZNF143 GTRD no Epithelial (MCF-7) 21350065
chr1 172469700 172470978 ZNF143 GTRD no Epithelial (MCF-7) 21350066
chr1 172469727 172470689 ZNF143 GTRD no Epithelial (MCF-7) 21350067
chr1 172469754 172470700 ZNF143 GTRD no Epithelial (MCF-7) 21350068
chr1 172469773 172470681 ZNF143 GTRD no Epithelial (MCF-7) 21350069
chr1 172469912 172470629 ZNF143 GTRD no Epithelial (MCF-7) 21350070
chr1 172469943 172470667 ZNF143 GTRD no Epithelial (MCF-7) 21350071
chr1 172469950 172470635 ZNF143 GTRD no Epithelial (MCF-7) 21350072
chr1 172469962 172469967 SP1 TRANSFAC yes 33133974
chr1 172469962 172469980 ESR1 JASPAR yes 33133975
Genes associated with rs576197533[chr1:172469963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More