EnhancerDB
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  3. rs576264055[chr12:109003587]
Enhancers that have rs576264055[chr12:109003587]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 108997229 109015819 enh14971
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
chr12 109003329 109003729 vista14818
VISTA
Transcript factors that have rs576264055[chr12:109003587]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109003199 109003719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570960
chr12 109003199 109003719 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056856
chr12 109003201 109003797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570961
chr12 109003201 109003797 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056857
chr12 109003294 109003629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570967
chr12 109003294 109003629 TCF3 UCSC Txn Factor no Conserved 108056864
chr12 109003294 109003629 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056865
chr12 109003300 109003618 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570968
chr12 109003300 109003618 TCF12 UCSC Txn Factor no Conserved 108056866
chr12 109003300 109003618 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056867
chr12 109003361 109003651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21570969
chr12 109003361 109003651 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108056868
chr12 109003415 109003619 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108056871
chr12 109003480 109003696 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108056873
chr12 109003584 109003598 RORA JASPAR yes 82473244
chr12 109003584 109003598 RORA JASPAR yes 123606301
chr12 109003585 109003934 ZNF143 GTRD no Epithelial (MCF-7) 21570973
chr12 109003585 109003934 ZNF143 GTRD no Epithelial (MCF-7) 108056874
chr12 109003586 109003601 MEF2A JASPAR yes 82473245
chr12 109003586 109003601 MEF2A JASPAR yes 123606302
chr12 109003587 109003602 MEF2C JASPAR yes 82473246
chr12 109003587 109003602 MEF2C JASPAR yes 123606303
Genes associated with rs576264055[chr12:109003587], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More