EnhancerDB
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  3. rs576405531[chr1:41169752]
Enhancers that have rs576405531[chr1:41169752]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs576405531[chr1:41169752]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41169745 41169755 NKX2-3 JASPAR yes 28336685
chr1 41169746 41169754 ISL2 JASPAR yes 28336686
chr1 41169746 41169755 NKX3-2 JASPAR yes 28336687
chr1 41169747 41169768 IRF1 JASPAR yes 28336688
chr1 41169748 41169763 FOXP1 JASPAR yes 28336689
chr1 41169750 41169765 FOXP1 JASPAR yes 28336690
chr1 41169752 41169767 FOXP1 JASPAR yes 28336691
Genes associated with rs576405531[chr1:41169752], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More