EnhancerDB
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  3. rs576476788[chr1:172948719]
Enhancers that have rs576476788[chr1:172948719]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs576476788[chr1:172948719]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172948368 172948932 ZNF274 GTRD no Cervix (HeLa-S3) 21350835
chr1 172948402 172948775 TCF7L2 GTRD no Colon (HCT116) 21350836
chr1 172948452 172948813 MYOD GTRD no Muscle (Myoblast) 21350837
chr1 172948501 172948803 TCF7L2 GTRD no Colon (HCT116) 21350838
chr1 172948715 172948724 JDP2 JASPAR yes 33174751
Genes associated with rs576476788[chr1:172948719], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More