EnhancerDB
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  3. rs576579624[chr12:54605022]
Enhancers that have rs576579624[chr12:54605022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54604917 54618893 enh2376
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus
Transcript factors that have rs576579624[chr12:54605022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54605010 54605024 PLAG1 JASPAR yes 121028562
chr12 54605011 54605025 PLAG1 JASPAR yes 121028563
chr12 54605012 54605026 PLAG1 JASPAR yes 121028564
chr12 54605013 54605025 TFAP2A JASPAR yes 121028565
chr12 54605013 54605026 TFAP2B JASPAR yes 121028566
Genes associated with rs576579624[chr12:54605022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More