EnhancerDB
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  3. rs577053534[chr12:122445421]
Enhancers that have rs577053534[chr12:122445421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122426565 122450555 enh2654
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Thymus Heart
Transcript factors that have rs577053534[chr12:122445421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122445222 122445945 ZNF143 GTRD no Epithelial (MCF-7) 21579586
chr12 122445292 122445936 ZNF143 GTRD no Epithelial (MCF-7) 21579587
chr12 122445322 122445830 ZNF143 GTRD no Epithelial (MCF-7) 21579588
chr12 122445371 122445957 ZNF143 GTRD no Epithelial (MCF-7) 21579589
chr12 122445413 122445428 TFAP2C JASPAR yes 124257437
chr12 122445415 122445427 TFAP2A JASPAR yes 124257438
chr12 122445415 122445427 TFAP2B JASPAR yes 124257439
chr12 122445415 122445427 TFAP2C JASPAR yes 124257440
chr12 122445415 122445429 EBF1 JASPAR yes 124257441
chr12 122445415 122445430 TFAP2A JASPAR yes 124257442
chr12 122445416 122445427 EBF1 JASPAR yes 124257443
Genes associated with rs577053534[chr12:122445421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More